CDS

Accession Number TCMCG017C32964
gbkey CDS
Protein Id OMO56160.1
Location complement(join(1857..2157,2389..2570,2865..3116,4043..4058,4243..4319,4711..4782,4871..4972,5149..5223,5428..5684,6172..6208))
GeneID InterPro:IPR000286
Organism Corchorus olitorius
locus_tag COLO4_35764

Protein

Length 456aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01022787.1
Definition Histone deacetylase superfamily [Corchorus olitorius]
Locus_tag COLO4_35764

EGGNOG-MAPPER Annotation

COG_category B
Description histone deacetylase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008092        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015631        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016810        [VIEW IN EMBL-EBI]
GO:0016811        [VIEW IN EMBL-EBI]
GO:0019213        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019902        [VIEW IN EMBL-EBI]
GO:0019903        [VIEW IN EMBL-EBI]
GO:0033558        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042903        [VIEW IN EMBL-EBI]
GO:0043014        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043621        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048487        [VIEW IN EMBL-EBI]
GO:0051721        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090042        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGCTTCAAACCTTCCGCCATCCATCTTTTGCAGGAAATGTGATGTTTTTGGTTCGAAATAATGTGCTAAAGTGGAAGAGTCATAGAAGATTTAGTCTAAATACGGCACTTTTGGGGGATGGGTGTTTTTGTAAACCTTCAATAGCAGGAAGGAAAGCCTACTCAAAAAGCATCAAAACTTCAGTTTCTTGCTCATATAGCACAGAGGAGAGTGATAGTTTGCCATCCTTAAAACAGCTGAGTGATGCGAGAGTGATTTACGCTGTTGCTCCAGCCCTGGGTCATAACAAGGAGGCACATCCAGAATGCAGTGCTAGAGTTCCTTCAATTGTGACTGCTCTTGAAAAGATGGAGCTAACCTCAAAGTTCCGTGGTTCAGACATCCTTGAACTTCAAAATTTCAAGCTTGCTTCAGTTGATGACATTGCAAGTGTTCACGCAACAGCTTATGTATCAGGCCTTGAAAAGGCTATGGATCGGGCCTCTGAGCAGGGCCTTATTGTAATTGAGGGCTCTGGACCAACATATGCTACTCCCACAACATTTCGTGAGTCACTAGTTGCAGCTGGAGCAGGACTTGCCTTAGTTGATTCAGTGGTGATGTCTCGACCTAGAACAGTCATGCAACTAGTTGTTGCAGCATCAAAGAACAGATTAGATCCTCCTATGGGTTTTGCTCTGATAAGACCTCCAGGGCACCATGCCATTCCAAAAGGTCCCATGGGGTTCTGTGTTTTCGGAAATGTGGCTATTGCAGCTCGTCATGCTCAGCGTGTACATGGATTAAAGAGAGTGTTTATTATTGATTTTGATGTTCACCATGGAAATGGAACAAATGATGCCTTCTTGGACGATCCAGATATATTTTTTCTTTCAACCCATCAAGATGGAAGCTACCCTGGCACTGGAAGAATTGATGAGATAGGTCATGGGGCTGGTGAAGGAGCAACACTTAATCTACCTTTACCTGGAGGCTCAGGTGACATTGCCATGAGAACTGTCTTTGATGAAGTCATTGTGCCCAGTGCTCAAAGGTTCAAGCCAGATATAATTCTTGTCTCTGCAGGGTATGATGGTCACGTATTGGATCCACTAGCTAGTTTGCAGTTTACAACAGGGACATACTACATGCTTGCGTCTAGTATCAAACAACTCGCTAAAGATTTATGTGGTGGCCGGTGTGTATTTTTCCTGGAAGGAGGATACAACCTCGATTCACTTTCATATTCCGTGGCAGACTCATTTCGTGCATTTCTTGGGGAGCCAAGTTTGGCACCTGAGTTTGATAACCCTGCCATATTATATGAAGAACCATCAACCAGGGTGAAGAAAGCGATTCAGAGGGTAAAGCACATACATTCACTGTGA
Protein:  
MELQTFRHPSFAGNVMFLVRNNVLKWKSHRRFSLNTALLGDGCFCKPSIAGRKAYSKSIKTSVSCSYSTEESDSLPSLKQLSDARVIYAVAPALGHNKEAHPECSARVPSIVTALEKMELTSKFRGSDILELQNFKLASVDDIASVHATAYVSGLEKAMDRASEQGLIVIEGSGPTYATPTTFRESLVAAGAGLALVDSVVMSRPRTVMQLVVAASKNRLDPPMGFALIRPPGHHAIPKGPMGFCVFGNVAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFLDDPDIFFLSTHQDGSYPGTGRIDEIGHGAGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQRFKPDIILVSAGYDGHVLDPLASLQFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLDSLSYSVADSFRAFLGEPSLAPEFDNPAILYEEPSTRVKKAIQRVKHIHSL